I was importing existing organization in CRM 2013 and my server restarted due to updates. When I logged in back to CRM server and open deployment manager, I see this organization but status is Pending. I am not able to delete this organization as well. What can be done to fix this?
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This has never happened to me but I would delete the organization and recreate it.
If you are adventurous, you can always look into the database in mscrm_config.dbo.organization to change the status yourself. This is the table behind the deployment manager.
In any case, it's probably a non managed case by Microsoft.