How to set a color by default in R for all plot.default, plot or lines calls

7
votes

to simplify my daily R interactions, I'd like to set up default colors for all my plots. For example, let's say I want to have all plots made with red lines (like in gnuplot...:-) )

So far, here is a snippet of my .Rprofile

setHook(packageEvent("grDevices", "onLoad"), 
    function(...) 
        grDevices::X11.options(width = 14, height = 8, type = "Xlib", xpos = 600,     ypos = 30, canvas = "grey87"))

suppressPackageStartupMessages( require(Defaults) )
suppressPackageStartupMessages( require(utils) )
suppressPackageStartupMessages( require(graphics) )

setDefaults("plot.default",frame.plot=FALSE, type='l', col=2)

What I do here is the following: when the grDevices package is loaded (by loading the graphics package), I call the X11.options with my prefered parameters: a wider box, light gray background, xlib calls (because I'm doing distant calls, and cairo in my current environment is just too slow (another problem to solve)) Then I silently load 3 packages, Defaults, utils and graphics. The second one is needed to avoid a find function error message.

Finally, the magic function setDefaults set-up 3 parameters to the scatter plot function plot.default. The 3rd parameter col is not a parameter of plot.default but one from the par() function.

But, doing a setDefaults call with par doesn't work either.

Any solution is welcome...

2
rcolorsplotdefault
?palette .... and set defaults on plot.xy ... – Ben Bolker
(this is a little more complicated than I thought -- plot.xy has some wrinkles that make it work badly with setDefaults -- but I still think it's the right track) – Ben Bolker
Can't you just put par(col="red") in your .Rprofile? – Sacha Epskamp

2 Answers

7
votes

You can use the "plot.new" hook to set default par values each time a new graphics frame is opened. (The hook's workings are documented in ?plot.new and ?setHook)

In your case, just add this line to your .Rprofile:

setHook("plot.new", function() par(col = "red"))
3
votes

The parameters such as color are set on a per device basis, so when you close one device and create a new one all the parameters are set back to their default values. To do this I would create your own device function that opens the device then sets the parameters, something like:

mydev.new <- function(...) {
  dev.new(...)
  par(col='red')
}

You could obviously replace dev.new with x11 or something else, but this is probably the most portable. Now you can open a new device using mydev.new and the default color will be set to red.

Further if you run the command 

options(device=mydev.new)

Then when you don't have a graphics device open and you run a plotting command, your function will be the one run to open a new plotting device and so the default will be red in that case as well. You could expand the mydev.new function (or whatever you want to call it) to set other options, take arguments, etc. for different cases you may want to work with.