Function executed via Erlport stops responding

Question

I am writing my thesis application. I need linear programming, but my app is written in Elixir, which is really not the language for such operations. That is why I decided to use Erlport as the Elixir dependency, which is capable of connecting Python code with Elixir. I'm also using Pulp as the python library for the optimization.

Elixir version: 1.10.4, Erlport version: 0.10.1, Python version: 3.8.5, PuLP version: 2.3

I've written such a module for Elixir-Python communication, which leverages the GenServer as the main 'communication hub' between Elixir and Python:

defmodule MyApp.PythonHub do
  use GenServer

  def start_link(_) do
    GenServer.start_link(__MODULE__, nil, name: __MODULE__)
  end

  def init(_opts) do
    path = [:code.priv_dir(:feed), "python"]
          |> Path.join() |> to_charlist()

    {:ok, pid} = :python.start([{ :python_path, path }, { :python, 'python3' }])

    {:ok, pid}
  end

  def handle_call({:call_function, module, function_name, arguments}, _sender, pid) do
    result = :python.call(pid, module, function_name, arguments)
    {:reply, result, pid}
  end

  def call_python_function(file_name, function_name, arguments) do
    GenServer.call(__MODULE__, {:call_function, file_name, function_name, arguments}, 10_000)
  end

end

The GenServer module is calling python file, which contains such a function:

def calculate_meal_4(products_json, diet_json, lower_boundary, upper_boundary, enhance):
  from pulp import LpMinimize, LpProblem, LpStatus, lpSum, LpVariable, value
  import json
  products_dictionary = json.loads(products_json)
  print(products_dictionary)
  diets_dictionary = json.loads(diet_json)
  print(diets_dictionary)

  model = LpProblem(name="diet-minimization", sense=LpMinimize)

  # ... products setup ...

  x = LpVariable("prod_1_100g", lower_boundary, upper_boundary)
  y = LpVariable("prod_2_100g", lower_boundary, upper_boundary)
  z = LpVariable("prod_3_100g", lower_boundary, upper_boundary)
  w = LpVariable("prod_4_100g", lower_boundary, upper_boundary)

  optimization_function = # ... optimization function setup ...

  model += # ... optimization boundary function setup ...

  model += optimization_function

  print(model)

  solved_model = model.solve()

  print(value(model.objective))

  return [value(x), value(y), value(z), value(w)]

The call to the GenServer itself looks like that:

PythonHub.call_python_function(:diets, python_function, [products_json, meal_statistics_json, @min_portion, @max_portion, @macro_enhancement])

where python_function is :calculate_meal_4 and products_json and meal_statistic_json are jsons containing required data.

While calling calculate_meal_4 via python3 diets.py, which launches the python script above with some example, but real (taken from the app), data everything works fine - I've got the minimized result in almost no time. The problem occurs while calling the python script via Elixir Erlport. Looking at the printed outputs I can tell that it seems working until

solved_model = model.solve()

is called. Then the script seems to freeze and GenServer finally reaches the timeout on GenServer.call function.

I've tested also the call on a simple python test file:

def pass_var(a):
  print(a)
  return [a, a, a]

and it worked fine.

That is why I am really consterned right now and I am looking for any advices. Shamefully I found nothing yet.

Ruben Helsloot Ruben Helsloot · Accepted Answer · 2020-10-12T19:45:01

Hmm, it might be that calling an external solver freezes the process.

Given that you can execute bash scripts using elixir, you can easily change the python script to be command line executable (I recommend click). Then, you can write the output to a .json or .csv file and read it back in with Elixir when you're done.

@click.group()
def cli():
    pass

@cli.command()
@click.argument('products_json', help='your array of products')
@click.argument('diet_json', help='your dietary wishes')
@click.option('--lower-bound', default=0, help='your minimum number of desired calories')
@click.option('--upper-bound', default=100, help='your maximum number of desired calories')
@click.option('--enhance', default=False, help="whether you'd like to experience our enhanced experience")
def calculate_meal_4(products_json, diet_json, lower_boundary, upper_boundary, enhance):
    pass

if __name__ == '__main__':
    cli()

which you can then call using python3 my_file.py <products_json> <diet_json> ... et cetera.

You can even validate the JSON and then return the parsed data directly.

Function executed via Erlport stops responding

1 Answers