I am applying the functions from the flexclust package for hard competitive learning clustering, and I am having trouble with the convergence.
I am using this algorithm because I was looking for a method to perform a weighed clustering, giving different weights to groups of variables. I chose hard competitive learning based on a response for a previous question (Weighted Kmeans R).
I am trying to find the optimal number of clusters, and to do so I am using the function stepFlexclust with the following code:
new("flexclustControl") ## check the default values
fc_control <- new("flexclustControl")
[email protected] <- 500 ### 500 iterations
fc_control@verbose <- 1 # this will set the verbose to TRUE
fc_control@tolerance <- 0.01
### I want to give more weight to the first 24 variables of the dataframe
my_weights <- rep(c(1, 0.064), c(24, 31))
set.seed(1908)
hardcl <- stepFlexclust(x=df, k=c(7:20), nrep=100, verbose=TRUE,
FUN = cclust, dist = "euclidean", method = "hardcl", weights=my_weights, #Parameters for hard competitive learning
control = fc_control,
multicore=TRUE)
However, the algorithm does not converge, even with 500 iterations. I would appreciate any suggestion. Should I increase the number of iterations? Is this an indicator that something else is not going well, or did I a mistake with the R commands?
Thanks in advance.