This issue was not reproduced and thus I forgot about it, until recently, 2 years afterward, I had a chance to get in touch with this issue in a different environment, and this time I have more ideas on its root cause.
It could be caused by the shift that comes in the bonding, for some reason, the traffic pattern fits the situation of triggering shifts again and again(the condition is quite strong I would say but there is a chance to be hit anyway, right?).
The condition of the shift was quoted as below and please refer to the full doc here: https://docs.openvswitch.org/en/latest/topics/bonding/
Bond Packet Output
When a packet is sent out a bond port, the bond member actually used is selected based on the packet’s source MAC and VLAN tag (see bond_choose_output_member()). In particular, the source MAC and VLAN tag are hashed into one of 256 values, and that value is looked up in a hash table (the “bond hash”) kept in the bond_hash member of struct port. The hash table entry identifies a bond member. If no bond member has yet been chosen for that hash table entry, vswitchd chooses one arbitrarily.
Every 10 seconds, vswitchd rebalances the bond members (see bond_rebalance()). To rebalance, vswitchd examines the statistics for the number of bytes transmitted by each member over approximately the past minute, with data sent more recently weighted more heavily than data sent less recently. It considers each of the members in order from most-loaded to least-loaded. If highly loaded member H is significantly more heavily loaded than the least-loaded member L, and member H carries at least two hashes, then vswitchd shifts one of H’s hashes to L. However, vswitchd will only shift a hash from H to L if it will decrease the ratio of the load between H and L by at least 0.1.
Currently, “significantly more loaded” means that H must carry at least 1 Mbps more traffic, and that traffic must be at least 3% greater than L’s.