I am running a multilevel logistic regression, using the function glmer
from package lme4
in R. My binomial outcome (or response-) variable is coded as c
and g
.
My question is: how can I know which level of the outcome variable is taken as the reference outcome?
It seems the default reference is the first alphabetically (so c
in my case), is this true?
I am guessing this after using the levels
and relevel
functions:
levels(data$Outcome)
# [1] "c" "g"
test <- relevel(data$Outcome, ref = "g")
# levels(test)
# [1] "g" "c"
This seems to say that c
was the reference before, but this is rather circumstantial.
My homework:
I did not find the answer using ?glmer
, or the online pdf manual of lme4
, or these related posts:
For the case of a 0/1 coded response:
Using glmer for logistic regression, how to verify response reference
Got the tip of using the 'recode' function from:
Logistic regression - defining reference level in R