There are several Stata commands that can be useful here.
The unab
command is used in the first example to make a list of variable in the dataset with fewer variables. The second and third example use the describe
command to obtain the list of variables in a dataset not currently in memory.
The final part the the example shows how to use extended macro list functions to obtain a list of common variables and the set of variables not common to both datasets.
* simulate 2 datasets, one has more variables than the other
sysuse auto, clear
save "data1.dta", replace
gen x = _n
gen y = -_n
save "data2.dta", replace
* example 1: drop after append
use "data1.dta", clear
unab vcommon : *
gen source = 1
append using "data2.dta"
replace source = 2 if mi(source)
keep `vcommon' source
* example 2: drop first then append
clear
describe using "data1.dta", varlist short
local vcommon `r(varlist)'
use `vcommon' using "data2.dta", clear
gen source = 2
append using "data1.dta"
replace source = 1 if mi(source)
* example 3: append and keep on the fly
use "data1.dta", clear
unab vcommon : *
gen source = 1
append using "data2.dta", keep(`vcommon')
replace source = 2 if mi(source)
* use extended macro list functions to manipulate variable list
clear
describe using "data1.dta", varlist short
local vlist1 `r(varlist)'
describe using "data2.dta", varlist short
local vlist2 `r(varlist)'
local vcommon : list vlist1 & vlist2
local vinonly1 : list vlist1 - vlist2
local vinonly2 : list vlist2 - vlist1
dis "common variables = `vcommon'"
dis "variables in data1 not found in data2 = `vinonly1'"
dis "variables in data2 not found in data1 = `vinonly2'"
ssc describe cfvars
. – Roberto Ferrer