Nobody said that installing OpenCV and their modules was easy.
Just like you, I already had Opencv 3.0.0 installed and running and wanted to add the contrib modules.
Steps:
1st- Delete and download again the OpenCV3.0.0 folder (is not necessary, but after twitching around, I prefer to download a new one) download the openccv_contrib
and place them in the same folder.
2nd- Go to the OpenCV3.0.0 and create the build folder.
3rd- Open Cmake gui and follow the steps form https://github.com/itseez/opencv_contrib.
3.1- Fill “Where is the source code” with the rotute of where is openCV3.0.0. (my case /Users/Rafearl/Program/ComputerVision/opencv-3.0.0)
3.2- Fill “Where to build binaries” with the build route(/Users/Rafearl/Program/ComputerVision/opencv-3.0.0/build)
3.3- Press configure
3.4- In the search bar search for “OPENCV_EXTRA_MODULES_PATH” and fill with the Opencv_contrib modules(/Users/Rafearl/Program/ComputerVision/opencv_contrib-master/modules)
3.5- Click configure again and then click generate. By default current generator: Unix makefiles
4th- In terminal go to your build folder
5th- make -j4 (4 is the number of cores of the processor)
6th- sudo make install
Now you can check the lib in the build folder that the contrib libraries are added
If you don´t want to download the OpenCV3.0.0 again just follow the same steps without downloading or deleting anything.
If you already have Opencv in Xcode, everything should work but just as a piece of advise; many of the OpenCV2.4 examples does´t work in the 3.0 version.