You absolutely can use a linear-time median selection algorithm to compute the pivot in quicksort. This gives you a worst-case O(n log n) sorting algorithm.
However, the constant factor on linear-time selection tends to be so high that the resulting algorithm will, in practice, be much, much slower than a quicksort that just randomly chooses the pivot on each iteration. Therefore, it's not common to see such an implementation.
A completely different approach to avoiding the O(n2) worst-case is to use an approach like the one in introsort. This algorithm monitors the recursive depth of the quicksort. If it appears that the algorithm is starting to degenerate, it switches to a different sorting algorithm (usually, heapsort) with a guaranteed worst-case O(n log n). This makes the overall algorithm O(n log n) without noticeably decreasing performance.
Hope this helps!