12
votes

I am somewhat new to R and have limited experience with plotting in general. I have been able to work get my data as a time series object in R using zoo, but I am having a hard time having the xaxis be labeled correctly, if it all.

When I plot my zoo object

plot(z)

The x-axis only shows one label, the year 2010. when the series is weekly spanning from April 2009 to October 2010.

I tried to convert my series back to a ts object, and even a data frame (only one column and doesn't include the dates).

Simply, how can I control the x-axis labels generally, and with time series objects?

Thanks in advance!

5

5 Answers

16
votes

Start with an example:

x.Date <- as.Date(paste(rep(2003:2004, each = 12), rep(1:12, 2), 1, sep = "-"))
x <- zoo(rnorm(24), x.Date)
plot(x)

If we want different tick locations, we can suppress the default axis plotting and add our own:

plot(x, xaxt = "n")
axis(1, at = time(x), labels = FALSE)

Or combine them:

plot(x)
axis(1, at = time(x), labels = FALSE)

You need to specify the locations for the ticks, so if you wanted monthly, weekly, etc values (instead of observations times above), you will need to create the relevant locations (dates) yourself:

## weekly ticks
plot(x)
times <- time(x)
ticks <- seq(times[1], times[length(times)], by = "weeks")
axis(1, at = ticks, labels = FALSE, tcl = -0.3)

See ?axis.Date for more details, plus ?plot.zoo has plenty of examples of this sort of thing.

11
votes

The axis labeling doesn't line up with even monthly divsions but may be useful in some situations. Random data (summed) over last 500 days:

xx.Date <- as.Date((Sys.Date()-500):Sys.Date())
x <- zoo(cumsum(rnorm(501)), xx.Date)
tt=time(x)
plot(x, xaxt ="n")
tt <- time(x)
ix <- seq(1, length(tt), by=60) #every 60 days
fmt <- "%b-%d" # format for axis labels
labs <- format(tt[ix], fmt)
axis(side = 1, at = tt[ix], labels = labs,  cex.axis = 0.7)

enter image description here

6
votes

plot.zoo uses the axis functions in R's classic graphics but zoo also offers lattice graphics as well via xyplot.zoo. Just changing plot to xyplot may be sufficient for your needs:

library(zoo)
library(lattice)

# create test data
z <- zooreg(1:83, start = as.Date("2009-04-01"), deltat = 7)

xyplot(z)

Note that there are further examples in ?plot.zoo and ?xyplot.zoo as well as the three vignettes that come with zoo. In those places you can also find find examples of a different approach showing how to use the axis function of classic graphics together with plot.zoo for highly customized axes.

1
votes

I have captured all the above and a couple of extra options in one place, for my own reference:

# Time series plots with good X axis labels
library(zoo)
# data
today = Sys.Date()
dates = as.Date((today-500):today)
z = zoo (100+cumsum(rnorm(501)), dates)

# method1 : default X axis labels do not look good
?plot.zoo
plot(z)
?plot.ts
plot(ts(z))

# method 2 : Lattice
library(lattice)
?xyplot.zoo
xyplot(z)
xyplot(z, lwd=2, col="tomato")

# method 3 : XTS
library(xts)
?plot.xts
plot(as.xts(z))
plot(as.xts(z), auto.grid=F, major.format="%b %y", las=2)

# method 4 : Base graph
timeline = time(z)
summary(timeline)
index = seq(from=1, to=length(timeline), 90) # put ticks every 90 days
plot(z, xaxt="n")
axis(side=1, at=timeline[index], label=format(timeline[index], "%b %y"), cex.axis=0.8)

# method 5 : ggplot
library(ggplot2)
library(scales)
?date_breaks
df = data.frame(date=as.POSIXct(time(z)), value=as.numeric(z))
head(df)
# default plot
ggplot(df, aes(x=date, y=value)) + geom_line()
# formatted
ggplot(df, aes(x=date, y=value)) + geom_line() + 
   scale_x_datetime(labels=date_format("%b '%y"))
# custom breaks
ggplot(df, aes(x=date, y=value)) + geom_line() + 
   scale_x_datetime(labels=date_format("%b '%y"), breaks=date_breaks("3 months"))
0
votes

if the time is in Date format, this might be helpful.

 ggplot(data_frame, aes(date,column)) + geom_point() +
    ggtitle("my title")+
    scale_x_date(date_breaks = "1 month",date_labels = "%b") + xlab("month") + 
    ylab("y_axis title")