python - How can I convert numbers to a color scale in matplotlib?

Question

I'm making a bar plot and I want the colors of the bars to vary from red to blue according to a color gradient. I have a dimension of the data frame that tells me where on the red-blue scale each bar should be. My current method is to manually convert these values to RGB colors by linearly interpolating between the RGB red and blue colors but I want an automatic way of converting my numeric values to a color scale. I also need to be able to have a colorbar legend to help interpret it.

ImportanceOfBeingErnest ImportanceOfBeingErnest · Accepted Answer · 2017-03-24T22:10:38

It's pretty straight forward to create a barchart and set the bar colors according to a value from the dataframe. A colormap and a normalization instance help converting the values to colors, which are understood by the color argument of matplotlib.Axes.bar. The colorbar is then created from a ScalarMappable using the same normalization and colormap as the bars.

import matplotlib.pyplot as plt
import matplotlib.colors
import numpy as np; np.random.seed(0)
import pandas as pd

x = np.arange(12)
y = np.random.rand(len(x))*51
c = np.random.rand(len(x))*3+1.5
df = pd.DataFrame({"x":x,"y":y,"c":c})

cmap = plt.cm.rainbow
norm = matplotlib.colors.Normalize(vmin=1.5, vmax=4.5)

fig, ax = plt.subplots()
ax.bar(df.x, df.y, color=cmap(norm(df.c.values)))
ax.set_xticks(df.x)

sm = plt.cm.ScalarMappable(cmap=cmap, norm=norm)
sm.set_array([])  # only needed for matplotlib < 3.1
fig.colorbar(sm)

plt.show()

For using a custom colormap with bar plots see Barplot colored according a colormap?

python - How can I convert numbers to a color scale in matplotlib?

1 Answers